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MAESTRO

MAESTRO is free for non-commercial use. By using this software you accept the terms of the License Agreement. Please do not hesitate to contact us in case of any questions.

MAESTRO 1.2.35

Linux 64bit    Linux 32bit    Windows 64bit    Windows 32bit    OS X

Notes
Alternative output format json; updated computation of Gly mutations; fix of minor bugs regarding the calculation of the accessible surface area and the handling of alternate locations. The changes may lead to slightly different predictions.

MAESTRO 1.1

Linux 64bit    Linux 32bit    Windows 64bit    Windows 32bit    OS X 64bit

New features in version 1.1: multithreaded mutation scanning (optional). negative residue identifiers are supported.

Alternative Ensembles

MAESTRO was trained on the data sets SP4 and MP for stability change predictions and on the data set SP3 for the prediction of disulfide bonds. For more details about the data sets see here. However, feel free to download the following configurations, if you prefer MAESTRO trained on one of the other alternative data sets.

Configuration	Configuration File	Ensemble Folder	Data Sets	Description
Default	configDef.xml	ensembleDEF	SP4+MP,SP3	For the prediction of stability changes upon mutations, MAESTRO was trained on the data sets SP4 and MP. The disulfide bond prediction is based on the training set SP3.
SP1	configSP1.xml	ensembleSP1	SP1	For all purposes (stability change and SS-bond prediction), MAESTRO was trained on the SP1 data set.
SP3	configSP3.xml	ensembleSP3	SP3	For all purposes (stability change and SS-bond prediction), MAESTRO was trained on the SP3 data set.
SP4	configSP4.xml	ensembleSP4	SP4	For all purposes (stability change and SS-bond prediction), MAESTRO was trained on the SP4 data set.
MP	configMP.xml	ensembleMP	MP	For all purposes (stability change and SS-bond prediction), MAESTRO was trained on the MP data set.
Score	configScore.xml	–	–	MAESTRO score configuration. Scores are utilized for all purposes.
Score nonlocal	configScoreNonLocal.xml	–	–	MAESTRO nonlocal-score configuration. Like the configuration before, but local pair interactions (sequence distance < 10) are omitted.

For the use of an alternative ensemble, simply download one of the configurations, unzip the file and copy the containing configuration file as well as the ensemble folder to MAESTRO’s installation path. After that you can use the new ensemble by calling MAESTRO with the alternative configuration file. For example:

./maestro configSP1.xml 1BV1.pdb1 --evalmut="I91{X}" --bu